Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVAISGGGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEAGIVKREGIPFEAIEITGFKR---S---------------LSLENIKT----VMRFLSGAKKSKQILRDFKPDVVIGTGGYVCGPVVYAAAKLKIPTLIHEQNSV-AGLT----NKFLSRYTDKVAI---------CFEEVSDSFA------SEKIVFTGNPRASEVVGVDSEGALEAYG-LVSGKPTVLVFGGSRGARGVNEAVEAVLPEWNNRDFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNSMKLSAKQMGRPDAAAKLVEAVLSIMK |
| 3OTG Chain:A ((21-407)) | MRVLFASLGTHGHTYPLLPLATAARAAG--HEVTFATGEGFA--GTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEIS--NYGAGLAALKAGIPTICHGVGRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGT-SSGGTV-EVLRAAIDGLAGLDADVLVASGPSLDVS---GLG--EVPANVRLESWVPQ-AALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWA----GDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGFA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167367 for 2996 contacts (-55.9/contact) +
2D Compatibility (PS) -37479 + (NN) -16769 + (LL) 1612
1D Compatibility (HY) -7600 + (ID) 2850
Total energy: -230453.0 ( -76.92 by residue)
QMean score : 0.474
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