Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNEDGKLTGHITDGLGFIANLRDASVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMH-PNEHETPISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDLYFN |
2D5C Chain:A ((6-245)) | -------------VLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRR-AFRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKAGGIPLKGPALVLGAG--GAGRAVAFALREAGLEVWVWN-------RTPQRALALAEEFGLRAVPLEKARE----------ARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWTG-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142947 for 2099 contacts (-68.1/contact) +
2D Compatibility (PS) -25943 + (NN) -5952 + (LL) 2788
1D Compatibility (HY) -13600 + (ID) 4000
Total energy: -189654.0 ( -90.35 by residue)
QMean score : 0.496
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