Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKVDSLSKKIDGKLLLDKITFEVKPGEIIGIVGRNGVGKTTLFRTIMGFYIPDAGDVYLDE---PLSKNHQLKQKL-FMLQDNL----NCWDGYKIP----TIKKFYQKTYPLFDGDKFDNLMKQVNLAKDVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQKKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHI-EESYHLESLREQAVKIQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTLEDLFIYHLEEQGGEKL |
| 2PMK Chain:A ((14-229)) | --------KPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRT--VIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSE------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91613 for 1482 contacts (-61.8/contact) +
2D Compatibility (PS) -21003 + (NN) -3335 + (LL) 7696
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -125805.0 ( -84.89 by residue)
QMean score : 0.476
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