Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
2OQQ Chain:A ((3-30))
--AYLSELENRVKDLENKNSELEERLSTLQ---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2875 for 102 contacts (28.2/contact) +
2D Compatibility (PS) -3134 + (NN) -2718 + (LL) 3296
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -1431.0 ( -14.03 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_2OQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQQ-query.scw
PDB file :
Tito_Scwrl_2OQQ.pdb
: