Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHSKNGYYDGLIFHRVIPEFMIQGGDPDGRGTGGESIWGESFEDEFSTE-AFNLRGALSMANAG---PNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
2POE Chain:A ((19-173))
----------------VRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPELKYDRRGILSMASKGAKKPNTNGSQFFITYS---------------------------SLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVI-
General information:
TITO was launched using:
RESULT:
Template:
2POE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47171 for 1177 contacts (-40.1/contact) +
2D Compatibility (PS) -15813 + (NN) -6863 + (LL) 2932
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -83915.0 ( -71.30 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_2POE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2POE-query.scw
PDB file :
Tito_Scwrl_2POE.pdb
: