Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANKRKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIGAVLTAIIFSRIKKISFWQLADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLHLPDFIINQMYIDGAYYQPTFLYESLWNVLGFVILLIIRRTKIRRGELFLGYVIWYSFGRFFIEGMRTDSLMWGDFRVSQALSLLLIVLSIGIIIYRRLKMNPPYYMEDKFGKVVKKK |
1EBV Chain:A ((266-328)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28815 for 317 contacts (-90.9/contact) +
2D Compatibility (PS) -6292 + (NN) -1127 + (LL) 19072
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -22362.0 ( -70.54 by residue)
QMean score : -0.005
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