Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYFQEARLIHVELPLIAPFKTSYGELNSKDFYIIELVNEEGIRGYGE-LEAFPLPDYTEETLSTAISIVKQHLLPILAQKEIRTPQEINQMFSWIQGNEMAKAAVELAVWDAFAKNEKLSLAKMIGAEKDSIAVGVSIGLQPDAETLVRLVSQYMDEGYERVKLKIAPKKDIQFVKAVREKFPNLSLMADANSAYNREDFWLLKELDHFNLEMIEQPFGAKDFVDHAWLQKKLKTRICLDENIRSLDDLKQAHMLGSCQAVNLKLARVGGMSEALKIAKYCSDNNLLVWCGGMLEAGIGRAHNIALAARAEFTFPGDISASNRYFNKDIVSPAFVLNQGKLTVPTGQGIGVALDLDVLQKYTKSTERILLNKGWS |
2ZC8 Chain:A ((1-360)) | MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFGEGLEGLGEGVMERLPL--YREETVAGARYLLEEVFLPRVLGRDLPNPEALREALAPFRGNPMAKAVLEMAFFDLWAKALGRPLWQVLGGVRQAVEVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVLKAVREAFPEATLTADANSAYSLANLAQLKRLDELRLDYIEQPLAYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGMLEAGVGRAHNLHLATLPGFTKPGDVSSASRYWEEDIVEEALEAKDGLMPVPEGVGIGVHLKLPFVERVT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254019 for 3236 contacts (-78.5/contact) +
2D Compatibility (PS) -37917 + (NN) -14582 + (LL) 572
1D Compatibility (HY) -30400 + (ID) 7150
Total energy: -343496.0 ( -106.15 by residue)
QMean score : 0.559
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