Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLGVIAAAIAVGLGA-----LGAGIGNGLIVSKTVEGVARQPEARSMLQSIMFVGVALVEALPIIAVVIAFMVLNK
1YCE Chain:A ((9-79))----VVLAASAVGAGTAMIAGIGPGVGQGYAAGKAVESVARQPEAKGDIISTMVLGQAVAESTGIYSLVIALILL--


General information:
TITO was launched using:
RESULT:

Template: 1YCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28606 for 340 contacts (-84.1/contact) +
2D Compatibility (PS) -6702 + (NN) -1290 + (LL) 168
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -43180.0 ( -127.00 by residue)
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_1YCE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YCE-query.scw
PDB file : Tito_Scwrl_1YCE.pdb: