Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKEGRDFNEVIQEITSIVDGPISGEV---VSLEADEMIAEG-RVIAKIHPN------MVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDDI--------------GDDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3TE9 Chain:A ((111-290))
--------------------------------------------KILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQVI--ALAGCDALTISPVLLEEL----------------------
General information:
TITO was launched using:
RESULT:
Template:
3TE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98932 for 1151 contacts (-86.0/contact) +
2D Compatibility (PS) -16107 + (NN) -5271 + (LL) 4636
1D Compatibility (HY) -13200 + (ID) 2800
Total energy: -131674.0 ( -114.40 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3TE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TE9-query.scw
PDB file :
Tito_Scwrl_3TE9.pdb
: