Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLYIIANPHAGNKNASTIVGKIQELYHTE--DISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYL-PQHI--PCAYYPVGSGNDFARALKIP-NLKETLTAIQTERLKEINCFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAIKSLLHSSK--VQVLVEGETGQQIKLNDLYFFALANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEIVELDQISLKCQKRYLYM |
| 3T5P Chain:A ((17-281)) | ----LIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFA---SKVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANGQHFLNFWGIGLV-----------------KAKLGKIGYYLSTIRTVKNAETFPVKITYDG----QVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKS-TGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCQIELLQGHFTM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132997 for 1923 contacts (-69.2/contact) +
2D Compatibility (PS) -26230 + (NN) -3432 + (LL) 2280
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -177879.0 ( -92.50 by residue)
QMean score : 0.477
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