Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIAIDAMGGDYAPKAIVEGVNQAISDFSDIEVQLYGDQKKIEKYLTVTERVSIIHTEEKINSDDEPAKAVRRKKQSSMVLGAKAVKDGVAQAFISAGNTGALLAAGLFVVGRIKGVDRPGLMSTMPTLDGVGFDMLDLGANAENTASHLHQYAILGSFYAKNVRGIEVPRVGLLNNGTEETKGDSLHKEAY-----ELLAAE-PSINFIGNIEAR---------DLMS-SVADVVVTDGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
2IS8 Chain:A ((1-73)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFRVGILTVSDKGFRGE--RQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATRELLDREVPGLAELMRLVGLRKTPMAALSRGVAGVRGRTLILNLPGSPKGARESLEAVLPVLPHALSLVTGKPWK---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6571 for 331 contacts (-19.9/contact) +
2D Compatibility (PS) -5928 + (NN) -1933 + (LL) 12644
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -5638.0 ( -17.03 by residue)
QMean score : 0.136
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