Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNQLIYTGKAKDIYSTKDENVIRTVYKDQATMLNGARKETIDGKGALNNQISSLIFEKLNMAGVVTHYIEQISKNEQLNKKVDIIPLEVVLRNVTAGSFSKRFGVEEGRVLETPIVEFYYKNDDLNDPFINDEHMKFLGIVNDEEIAYLKGETRRINELLKDWFAQIGLNLIDFKLEFGFDKDGKIILADEFSPDNCRLWDAEGNH-MDKDVFRRDLGSLTDVYQVVLEKLIAL
2YZL Chain:A ((9-239))LKKQPLYSGKAKSIYEIDDDKVL-IEFRDDITAG-GAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYPFEEGKELPFPIVQFDYKNDEYGDPMLNEDIAVALGLATREELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGNLLVADEISPDTMRLWDKETRDVLDKDVFRKDLGDVIAKYRIVAERLGLL


General information:
TITO was launched using:
RESULT:

Template: 2YZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66967 for 1800 contacts (-37.2/contact) +
2D Compatibility (PS) -24254 + (NN) -4363 + (LL) 20
1D Compatibility (HY) -20000 + (ID) 5200
Total energy: -120764.0 ( -67.09 by residue)
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_2YZL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YZL-query.scw
PDB file : Tito_Scwrl_2YZL.pdb: