Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAGASSYSTYKNGIEIEVDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDAHTRTSLNLSEKLGYEFSHEYIAYEID
3G3S Chain:A ((3-249))
---AEQMRRVARLFGDWPETIIWTCLEGTMGDIYVDDSQSPQSALALYGRQSFFGFLAGQPHRDLLKICEGKNIILVPQNQAWSDLIEEVYGDGVRFFTRYATKKDTEFDLGHLQKLVDDLPESFDMKLIDRNLYETCLVEEWSRDLVGNYIDVEQFLDLGLGCVILHKGQVVSGASSYASYSAGIEIEVDTREDYRGLGLAKACAAQLILACLDRGLYPSWDAHTLTSLKLAEKLGYELDKAYQAYEWR
General information:
TITO was launched using:
RESULT:
Template:
3G3S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153466 for 2032 contacts (-75.5/contact) +
2D Compatibility (PS) -26199 + (NN) -10910 + (LL) 448
1D Compatibility (HY) -28400 + (ID) 6650
Total energy: -225177.0 ( -110.82 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3G3S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G3S-query.scw
PDB file :
Tito_Scwrl_3G3S.pdb
: