Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETI--DFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQAS-KSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSD-----FEKVLKALKN-KGYTPGSFFANGQGGDQGPRAFFANLYSAPITDKEVTKYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSA-DIQN-FANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPS-EDGKPDLEYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVI----RTGAFPVRTSFGDLYKGDKRMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 4MFI Chain:A ((53-351)) | -----------------------------------------------------------ERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLIS---WTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNS------------IHGKGYAAVANDIANEFATGILASAV----ASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTN-----PTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29699 for 2151 contacts (-13.8/contact) +
2D Compatibility (PS) -29688 + (NN) -5593 + (LL) 6116
1D Compatibility (HY) -12400 + (ID) 3600
Total energy: -74864.0 ( -34.80 by residue)
QMean score : 0.367
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