Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKANQLIAAIFDVNNTFMQGCNVVFDLALLNLLFMITCLPLVTIGAAKISLYRTLWQKLEGDQTNLLILYIKHLKKEWFQGMLLGLVELSILVVIIFDLTILHYQIGFIVSFLKITCYAFLLLTVMTSIYLFPMAARYEMSLLDTVKKSFIMACLNLKWTGVLMFLLIMTWFIMVQSSLLFMLTVSAIFIFAYTAFAYFKIIILQKQFAYFSKQQGDYQ |
| 2JTT Chain:C ((189-219)) | ---------------------------------------------SEGLMNVLKKIYE--DGDDD-----MKRTINKAWVESR----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2310 for 115 contacts (20.1/contact) +
2D Compatibility (PS) -3357 + (NN) -2704 + (LL) 21244
1D Compatibility (HY) -2800 + (ID) 200
Total energy: 14493.0 ( 126.03 by residue)
QMean score : 0.057
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