Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSA--AFNKLLPEVQL--DAAVSRNFSKSFDIFENRIQNKALSKIVVLAVGVNSLDN----YKTDLSQFIKSLP---KGHRLIIVTPYNAKN-----MSQVTTVRDYELSLMKKYNYITVADWYKVATEHP----EIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
| 1FXW Chain:F ((36-217)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCH-DMFDFLHLTG-G--GYAKICKPLHELIMQLL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71192 for 1252 contacts (-56.9/contact) +
2D Compatibility (PS) -17244 + (NN) -1582 + (LL) 35860
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -62008.0 ( -49.53 by residue)
QMean score : 0.532
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