Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRYSKE---IIQLAIPAMIENILQMLMGVVDNYLVAQLGVVAVSGVSVANNIITVYQAIFIALGASIASLLAKSLAGSEKDDAISV-CSQAIFLTLLIGAVLGIISIVFGQTFF-KLLGTTKSVAQVGGLYLAIVGGGVVTLGMLTTLGSFLRVQGQPRLPMYVSIFVNFLNAVLSGFAIF----EWRYGLVGVAVSTLIARLIGICILAKYLPIKK---------IIKRMTWKISAQIWNLALPSAGERLMMRAGDVVIVAIVVQLGTNVVAGNAIGETLTQFNYMPGLGIATATIILTAKYVGQKNRESIEETIQSSYYIGLVLMILISSFMLLAGKPLTQLFTNNPSAIKGSLIVILLSFVGVPATIGTLVYTAAWQGLGNAKLPFYTTTIGMWLIRVVLGYLLGIVF-----ELGLLGVWMATIADNIFRWLFLKVHYHRYIQKM
3MKU Chain:A ((6-429))-RYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVAQ-LNGAGRQHKIPFEVHQGLILALLVS--VPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQKQS


General information:
TITO was launched using:
RESULT:

Template: 3MKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -369125 for 3562 contacts (-103.6/contact) +
2D Compatibility (PS) -39442 + (NN) 8461 + (LL) 516
1D Compatibility (HY) -34400 + (ID) 4500
Total energy: -438490.0 ( -123.10 by residue)
QMean score : 0.273

(partial model without unconserved sides chains):
PDB file : Tito_3MKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MKU-query.scw
PDB file : Tito_Scwrl_3MKU.pdb: