Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIADILKREGFVKNVEVIEDDKQGIIRVFLKYGQN-------GERVITNLKRISKPGLRVYTKHEDMPKVLNGLGIAIVSTSEGLLTDKEARQKNVGGEVLAYIW
1J5E Chain:H ((1-138))
-MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW
General information:
TITO was launched using:
RESULT:
Template:
1J5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77636 for 958 contacts (-81.0/contact) +
2D Compatibility (PS) -14160 + (NN) -2613 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -111301.0 ( -116.18 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1J5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J5E-query.scw
PDB file :
Tito_Scwrl_1J5E.pdb
: