Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIYHMILCNSDIMKILAIIKSLPLN----------DCWLCAGTLRNFIWNKLSGINETLTSDIDVVFFDKNISYEETVVLEQQLKDNYPQYDWELKNEFYMNTHSPNTPKYTSSKDAISKFPEKCTAVGARLDDRNQLELYLPYGEEEILNFIVSPTPYFEEDLLRYNVYLKRVDKKKWNNIWPRLTIIKK |
1KVN Chain:A ((30-69)) | ---------PNVKLHELVEASKELGLKFRAEEKKYPKSWWEEGGRVVVEKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3510 for 115 contacts (-30.5/contact) +
2D Compatibility (PS) -3277 + (NN) -1367 + (LL) 7740
1D Compatibility (HY) -400 + (ID) 300
Total energy: -1114.0 ( -9.69 by residue)
QMean score : 0.119
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