Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVPVENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNESDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
| 4OXD Chain:D ((22-180)) | -------------------------------------------------------------------IIVAN---KHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDH---YSGFRSYETQTKLYQD------------------------SARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLDHAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKE-AKEIAESGLSLEEYYGFEGGDYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29111 for 1070 contacts (-27.2/contact) +
2D Compatibility (PS) -15259 + (NN) -2748 + (LL) 7048
1D Compatibility (HY) -6800 + (ID) 3050
Total energy: -49920.0 ( -46.65 by residue)
QMean score : 0.393
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