Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKIS---EVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
3W61 Chain:A ((10-67))
---------------------RIVEAAERVPGVRGVIH--------------------LRARYVGQDIWADMIIGVDPENTVEQAHEICEAVQAAVCGKIRRIESLAVSAEARE----------
General information:
TITO was launched using:
RESULT:
Template:
3W61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32419 for 302 contacts (-107.3/contact) +
2D Compatibility (PS) -5806 + (NN) -625 + (LL) 3456
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -37094.0 ( -122.83 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_3W61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W61-query.scw
PDB file :
Tito_Scwrl_3W61.pdb
: