Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIFEKAPAKLNLGLDIKGRCDDGYHELAMIMVSIDLNDYVTISELKEDCIVIDSDSSKMPLNNDNDVFKAADIIKNQYGINKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDVPYCLGGGCSLVLGKGEIVKPLPTLRPCWIVLVKPDFGISTKSIFRDIDCKSISRVDIDLLK-SAILSSDYQLMVKSMGNSLEDITITKNPVISTIKERMLNSGADVALMTGSGPTV--FSMCSTE-KKADRVFNSMKGFCKEVYKVRLLR |
| 2VF3 Chain:A ((9-264)) | ------SPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYI---REGVLRVETNIG-IP-QEENLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFVTPEYAEEKIQRIISGE----VEEIENVLGDIARELYPEINEVY-RFVEYLGFKPFVSGSGSTVYFFGGASEELKKAAK----MRGWKVVELEL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102675 for 2038 contacts (-50.4/contact) +
2D Compatibility (PS) -28036 + (NN) -12124 + (LL) 2636
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -158549.0 ( -77.80 by residue)
QMean score : 0.392
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