Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNKQIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSGMN-------NVPENLVTMT-KYLNTGFSENNPDGMLYYENRLDSWLANHKNFWLDYKVTPIYEGNNLVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
| 3S5B Chain:A ((88-157)) | ----------------------------------------------------------------------------------------------------------------SGFDRGHLAAAGNHRKSQLAVDQTFYLSNMSPQVGRGFNR-------DKWNDLEMHCRRVAKK--MINSYIITGPLYLPKLEGDGKKYIKYQVIGDNNVAVPTHFFKVALFEVTPGKFELESYILPNAVIEDTVEISKFHVPLDAVERSAGLEIFARLDPKSIVKENGAKK-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12979 for 308 contacts (-42.1/contact) +
2D Compatibility (PS) -6650 + (NN) 43 + (LL) 11016
1D Compatibility (HY) 800 + (ID) 550
Total energy: -8320.0 ( -27.01 by residue)
QMean score : 0.024
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