Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKYYIVIGYLISMLITVAGVFFGLNHMLIETRGVYYILSVTIIACIVGGIVNLFLLSSVFTSLKKLKQKMKDISQRCFDTKAQICSPQEFKDLETAFNQMSSELESTFKSLNESEREKTMMIAQLSHDIKTPITSIQSTVEGI--LDGIISEEEVNYYLNTISRQTNRLNHLVEELSFITLETMSDTAEPHKE-ETIYLDKLLIDI----LSEFQLVFEKENRQVMIDVAPDVSKLSSQYDKLSRILLNLISNAVKYSDPGSPLTIKAYSNRQDIVIDIIDQGYGIKDEDLASIFNRLYRVESSRNMKTGGHGLGLYIARQLAHQLNGDILVESQYQKGSKFSLVLKLQK |
| 4Q20 Chain:A ((25-254)) | --------------------------------------------------------------------------------------------------------ALADRSAALAEAERLKRDFVGNVSYELRTPLTTIIGYSELLERAD---SERGRNHVAAVRAAATQLARSIDDVLDMAQI----DAGEMALEIEDIRVSDLLLNAQERALKDAQL----GGVTLAVECEEDVGLIRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIFDRFV------GRDRGGPGLGLALVKALVELHGGWVALESEPGNGSTFTCHLPETQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74496 for 1603 contacts (-46.5/contact) +
2D Compatibility (PS) -23619 + (NN) -6943 + (LL) 10920
1D Compatibility (HY) -8000 + (ID) 3050
Total energy: -105188.0 ( -65.62 by residue)
QMean score : 0.482
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