Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKRYDEEFKQSLVNLYQ-TGKTQSELCKDYGVSTSTLAKWIKQYSQFKLEDNSVLTAKQIQELQKHNAQLEEENLILKKASAIFMQNLK
2COB Chain:A ((11-58))
---YRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMR-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2COB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17919 for 295 contacts (-60.7/contact) +
2D Compatibility (PS) -5056 + (NN) -2281 + (LL) 3056
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -24250.0 ( -82.20 by residue)
QMean score : 0.761
(partial model without unconserved sides chains):
PDB file :
Tito_2COB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2COB-query.scw
PDB file :
Tito_Scwrl_2COB.pdb
: