Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIAIPAFALSVLSGQFIGQKLADSLVYQASRTVRADFMKGFGNMQLGSDSDTDMFMQTKCTSEA
2O01 Chain:I ((1-30))
MINLPSLFVPLVGLLFPAVAMASLFLHVEK----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4211 for 122 contacts (-34.5/contact) +
2D Compatibility (PS) -2766 + (NN) 1984 + (LL) 1836
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -7007.0 ( -57.43 by residue)
QMean score : -0.251
(partial model without unconserved sides chains):
PDB file :
Tito_2O01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O01-query.scw
PDB file :
Tito_Scwrl_2O01.pdb
: