Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
1NUE Chain:A ((3-134))
LERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCI-----QVGRNIIHGSDSVKSAEKEISLWFKP
General information:
TITO was launched using:
RESULT:
Template:
1NUE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74145 for 993 contacts (-74.7/contact) +
2D Compatibility (PS) -13956 + (NN) -4374 + (LL) -244
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -109469.0 ( -110.24 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1NUE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NUE-query.scw
PDB file :
Tito_Scwrl_1NUE.pdb
: