Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MFGKLLKY--ELKSVGKWYLTLNAAV-----LLVSIILGLVLKALGGNVSTDTNSTSAQIFTIILVLLLAMVISG---------------SLLSTLAIIIKRFYSNIFGRQGY-----LTLTLPVTTNQIICSKLLASLLWSIFNIFIVIIGIILVILPLVG-IGQFVVAFPEIYKIISSSNAPLFIAYFFLSYVAGTLLIYLSIAVGQLFTNKRVLMGIVS--------YFGISLLITFLTLIIDS------IFHIDLFNSHANATFSQPVLLYNILVSIVEIAIFYMLTHSIIKYKLNIQ |
| 2Y8V Chain:A ((8-287)) | PEHRRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHEMYNPLWAEVPVLKRSGVKVMGMLGGAAQGSYRCLDGDQEKFERYYQPLLAMVRRHQLDGLDLDVEEEMSLPGIIRLIDRLKLDLGDDFIITLAPVAAALLGIGNLSGF--DYRQLEQQRGSK-ISWYNAQFYNGWGLAEDPRMYAAIVAQGWSPQRVVYGLLTNPGNGSQGYVPRERIGPVLAVLVEQFPNFGGVMGWEYFNSIPGEQ-QSPWQWAAEMSLSMH------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269104 for 1649 contacts (-163.2/contact) +
2D Compatibility (PS) -23822 + (NN) 7059 + (LL) 2712
1D Compatibility (HY) -10800 + (ID) 1800
Total energy: -295755.0 ( -179.35 by residue)
QMean score : 0.197
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