Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKVRRHFTDDFKQQIVDLYNV--GRKRSSLIKEYELTPSTFDKWVRQAKTTGSFKSVDNLTDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK
1HLV Chain:A ((1-51))
-MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKG
General information:
TITO was launched using:
RESULT:
Template:
1HLV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12339 for 254 contacts (-48.6/contact) +
2D Compatibility (PS) -4903 + (NN) 1136 + (LL) 208
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -18298.0 ( -72.04 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_1HLV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HLV-query.scw
PDB file :
Tito_Scwrl_1HLV.pdb
: