Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIREQEFVNQYHYDARNLEWEEENGTPKTNFEVTFQLANRDEAAKVTSIVAVLQFV-IVRDEFVISGVISQMAHIQGRLINEPSE--------FSQDEVENLAAPLLEIVKRLTYEVTEIALDRPGVTLEFNS
3ERV Chain:A ((42-133))
-------------------------------------QLPELDRGCEVTSLAMMLQYAGITVDKMKLANEIKKVDFMNDGVRGNPNEGFVGNIYTFSESGYGVYHGPLFQLAKKY---LPNKAVDLTGKSIEELY
General information:
TITO was launched using:
RESULT:
Template:
3ERV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26170 for 503 contacts (-52.0/contact) +
2D Compatibility (PS) -8044 + (NN) 889 + (LL) 3120
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -36905.0 ( -73.37 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_3ERV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ERV-query.scw
PDB file :
Tito_Scwrl_3ERV.pdb
: