Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVALIPEKCIACGLCQTYSN--IFDYQDDGIVKFSDTDNLEKEVPNSDQDTV------LAVKSCPTKALTIL
2ZVS Chain:A ((2-60))
---LLITKKCINCDMCEPECPNEAISMGDHI-YEI-N--------SDKCTECVGHYETPTCQKVCPIPNTIVK
General information:
TITO was launched using:
RESULT:
Template:
2ZVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29350 for 318 contacts (-92.3/contact) +
2D Compatibility (PS) -5171 + (NN) -1701 + (LL) 1176
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -39246.0 ( -123.42 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_2ZVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZVS-query.scw
PDB file :
Tito_Scwrl_2ZVS.pdb
: