Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVLETYFPEYDLVWRSSVEPA-RKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELENCYITQVYTPNAGDGLKRLGDR-QIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQDHTPIILEIEL |
3W2Y Chain:A ((7-260)) | LKIISWNVNGL---------RAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRK-LRHVEGY--------RSFFTPAERKGYSGVA-MYTK--VPPSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSD-PGQYTSWSYRTRARE-RNVGWRLDYFFVNEEFKGKVKRSWILSDVMGSDHCPIGLEIEL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -65609 for 2079 contacts (-31.6/contact) +
2D Compatibility (PS) -27223 + (NN) -10373 + (LL) 1748
1D Compatibility (HY) -18400 + (ID) 4500
Total energy: -124357.0 ( -59.82 by residue)
QMean score : 0.474
|
|
|