Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKFQVISHPLIQHKLSILRRTTTSTKDFRELVDEIAMLMGYEVSRDLPLEDVEIQTP--VATTVQKQLAGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETFQPVE-------YLVKLPEDIDQR--QIFVVDPMLATGGSAILAVDSLKKRGAASIKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGTK
1VST Chain:A ((5-216))
-----VIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIP-DIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG--
General information:
TITO was launched using:
RESULT:
Template:
1VST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176277 for 1583 contacts (-111.4/contact) +
2D Compatibility (PS) -21294 + (NN) -1632 + (LL) 572
1D Compatibility (HY) -17200 + (ID) 3650
Total energy: -219481.0 ( -138.65 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1VST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VST-query.scw
PDB file :
Tito_Scwrl_1VST.pdb
: