Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRIWYLIII-ITVILGGLVMKNLFATTG----ESSKKQEQDRVVKYIKQHVELTNGEP-VNQIE-FVEFEKNQMTGSWLLTSKIN-NKFFISFKIDEF--GGEIRTSNYK---------ANEFNVNSEKQNIKSNNKLEVSYVEDN |
| 1YQ5 Chain:A ((197-340)) | --GGVTDALSLMYSTSTGGPASIAANALTDFDLSGALTVNSVGTGLTKSAAGIQLAAGKSGLYQITMTVKNNTVT-TGNYLLRVKYGSSDFVVACPASSLTAGGTISLLIYCNVLGVVSLDVLKFSLCNDGAAL-SNYIINITAAKIN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34813 for 838 contacts (41.5/contact) +
2D Compatibility (PS) -12200 + (NN) 7149 + (LL) 544
1D Compatibility (HY) 7200 + (ID) 200
Total energy: 37306.0 ( 44.52 by residue)
QMean score : 0.106
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