Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEGKPTGEIVAYKAWFVQEGQDPFQVKFEETIELPAFQSMIQFDTLQACEVKYNIYFKANGIKEVR
3L9A Chain:X ((9-88))
RDFFVITNS---EYTFAGVHYA-KGAVLHVS----PTQK-------------RAFWVIADQENFIKQVNKNIE--YVEKNASPAFLQRIVEIYQVKFEGKNVH---
General information:
TITO was launched using:
RESULT:
Template:
3L9A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21627 for 545 contacts (-39.7/contact) +
2D Compatibility (PS) -8271 + (NN) -445 + (LL) 1444
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -34599.0 ( -63.48 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_3L9A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9A-query.scw
PDB file :
Tito_Scwrl_3L9A.pdb
: