Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGGMGNMQKMMKQMQKMQKDMAKAQEELAEKVVEGTAGGGMVTVKANGQKEILDVIIKEEVVDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFTKGMNMPGLF
1RIY Chain:A ((3-69))
-------------------------------------------------KKELIDRVAKKAGAKKKDVKLILDTILETITEALAKGEKIQIVGFGSF----------
General information:
TITO was launched using:
RESULT:
Template:
1RIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53 for 232 contacts (-0.2/contact) +
2D Compatibility (PS) -5114 + (NN) -2997 + (LL) 3868
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -7396.0 ( -31.88 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1RIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RIY-query.scw
PDB file :
Tito_Scwrl_1RIY.pdb
: