Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLD----DTTQQIEKFKADKKESKTQKTEQTDIGEGYDNLARLYQEGFHICNVHYGSVRKEDCLFCLSFLNKK |
5E86 Chain:A ((552-618)) | ---KERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDK--ETMEKAVEEKIEWLESHQDADIEDFKAKKKE--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5E86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9545 for 356 contacts (26.8/contact) +
2D Compatibility (PS) -6849 + (NN) -4568 + (LL) 3372
1D Compatibility (HY) 0 + (ID) 1100
Total energy: 400.0 ( 1.12 by residue)
QMean score : 0.371
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