Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTRQTKKLCHVYEIETPLVSY----HEHNKESSGHKIIEWLKSGKNIALVSDAGLPTISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVPQP------FFFYGFLNRQKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEI-LGD-REIAVTRELTKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQWWETLTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ |
| 1S4D Chain:A ((6-252)) | -----FAGLPALEKGSVWLVGAGPGDPGLLTLHAANALRQADVIVHDA-LVNEDCLKLARPGAVLEFAGKRGPSPKQRDISLRLVELARAGNRVLRL-KGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHD------RINWQGIASGSPVIVMYMAMKHIGAITANLIAGGRSPDEPVAFVCNAATPQQAVLETTLARAEADVAAAGLEPPAIVVVGEVVRLR----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112239 for 1912 contacts (-58.7/contact) +
2D Compatibility (PS) -24331 + (NN) -9982 + (LL) 5776
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -147476.0 ( -77.13 by residue)
QMean score : 0.427
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