Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKI-PHLDQLVIFAGACQSHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN |
4R3U Chain:C ((26-106)) | -----------------------------------------------------------------------------------------------------------------LDGHDRGVKVVARALRDAGMDVIYSGL--HRTPEEVVNTAIQEDVDVLGVSLLSGVQ--------------LTVFPKIFKLLDERGAG--DLIVIAGGV------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22205 for 492 contacts (-45.1/contact) +
2D Compatibility (PS) -8778 + (NN) -7500 + (LL) 15388
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -25345.0 ( -51.51 by residue)
QMean score : 0.436
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