Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEGKNAVITLEV-SGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAIGVKNGGVLQQPLYALTVKAK-PKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASILPPQQQEAAEVDEEESADAQPEGENEQ
3PIO Chain:S ((3-175))---LTAKPRTP------KQKLDESMIAAVAYNKEN-NVSFALDRKAFDRAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVLPPR-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3PIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59866 for 1140 contacts (-52.5/contact) +
2D Compatibility (PS) -18498 + (NN) -5697 + (LL) 2144
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -94717.0 ( -83.09 by residue)
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_3PIO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PIO-query.scw
PDB file : Tito_Scwrl_3PIO.pdb: