Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIEL-NQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLGTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLEVMNEFNAKV
3WH4 Chain:A ((9-192))
--LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPN-FHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAMNQINA--
General information:
TITO was launched using:
RESULT:
Template:
3WH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112354 for 1531 contacts (-73.4/contact) +
2D Compatibility (PS) -19299 + (NN) -3966 + (LL) 744
1D Compatibility (HY) -14000 + (ID) 3650
Total energy: -152525.0 ( -99.62 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_3WH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WH4-query.scw
PDB file :
Tito_Scwrl_3WH4.pdb
: