Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMHNRPERNYNDLLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGYPVLLATSRKRFIGRVLDLPPEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG
3H2N Chain:A ((34-294))
------------------LNLNEKTLIMGILNVTPDSF---GSYNEVDAAVRHAKEMRDEGAHIIDIGGESTR-----VSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK------
General information:
TITO was launched using:
RESULT:
Template:
3H2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160232 for 2184 contacts (-73.4/contact) +
2D Compatibility (PS) -28361 + (NN) -19870 + (LL) 1000
1D Compatibility (HY) -31600 + (ID) 8550
Total energy: -247613.0 ( -113.38 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3H2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H2N-query.scw
PDB file :
Tito_Scwrl_3H2N.pdb
: