Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVRGMDIVIVTTANTDEEARELLTQVGMPFQK
5ADY Chain:F ((1-178))
-AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK
General information:
TITO was launched using:
RESULT:
Template:
5ADY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22216 for 1213 contacts (-18.3/contact) +
2D Compatibility (PS) -17930 + (NN) 2920 + (LL) 208
1D Compatibility (HY) -21200 + (ID) 5250
Total energy: -63468.0 ( -52.32 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_5ADY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ADY-query.scw
PDB file :
Tito_Scwrl_5ADY.pdb
: