Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNIGKTEFILLLVVGILTIINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
1NZ9 Chain:A ((132-156))
REGDQVRVVSGPFADFTGTVTEINP-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8950 for 89 contacts (-100.6/contact) +
2D Compatibility (PS) -2687 + (NN) 376 + (LL) 2696
1D Compatibility (HY) 2400 + (ID) 250
Total energy: -6415.0 ( -72.08 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1NZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NZ9-query.scw
PDB file :
Tito_Scwrl_1NZ9.pdb
: