Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIYGIYMDRPLSQEETDRLMSFVSAEKREKCRRFYHKEDAHRTLLGDVLVRSVISEQYQLNKADIRFSAQEYGKPCIPDLPNAHFNISHSGHWVIGAFDS----DPIGVDIEKMKPISLGIAERFFSKNEYSDLLSKHKDEQNDYFYHLWSMKESFIKQEG--KGLSLPLDSFSVRLHED-----GRVSVELPEH------HTPCFI-KTYEVDPGYKMAVCAARPDFPEDITMISYEALL |
4U89 Chain:A ((49-247)) | -------------------PGLTPLPEEAPLIARS-VAKRRNEFITVRHCARIALDQ-LGVP--PAPILKGDKGEPCWPD--GMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPNGVLDAISLPAERADMPRTM-PAALHWDRILFCAKEATYKAWFPLTKRWLGFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50185 for 1367 contacts (-36.7/contact) +
2D Compatibility (PS) -19295 + (NN) -4660 + (LL) 3092
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: -73898.0 ( -54.06 by residue)
QMean score : 0.426
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