Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSKQWTRIILITSPFAIALSLLLSILY-GAKHLSTDIVFTSLIHFDPGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMMPNGFTPVQLAIIGTVTSMLLSSLSAAMSIYFQISQDLSFWYSARLHQMSPDFLKLAAPFFLIGIIMAISLSKKVTAVSLGDDISKSLGQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPH----ITRFLVGSDYSRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG |
3G9H Chain:A ((67-328)) | ------------QFGLNASIAEVLNASFKDGMLQNSQLIGEIALNYLPN------------SVMNSPLPIGINLRINNGAK---FEKVILNQAFIERVAPEEFKVNPSFI---DSRTLGAIKYSIKEPI-----------------APIVIHPVWRF-----ESHQASVVLTVKMS---------------PSLPDEISQIVIEDLVVFVNIDGANATSALSKPQGSFSKEKKRITWRFKEPVVLTRNGEGQRLIARFITDGLAHESAKGVITKFTISETDNVALPHSGAGSGITLTCQELDENNPFGGEWLDVNTKRTLTTGNYHGLA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294678 for 2003 contacts (-147.1/contact) +
2D Compatibility (PS) -28313 + (NN) -4285 + (LL) 6100
1D Compatibility (HY) -1200 + (ID) 1650
Total energy: -324026.0 ( -161.77 by residue)
QMean score : 0.186
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