Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDKRFTS--LP---KEVLSQA---------LGIQDRYPVVILKDDLPVGFFILHASKETLASYSNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRI---GPLGEQLILHHFL
1TIQ Chain:A ((2-170))
---SVKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNID-DAQSE-EMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALER--NKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSFYMGDEEQTDLIMAKT-
General information:
TITO was launched using:
RESULT:
Template:
1TIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97653 for 1051 contacts (-92.9/contact) +
2D Compatibility (PS) -16446 + (NN) -3389 + (LL) 704
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -123784.0 ( -117.78 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1TIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIQ-query.scw
PDB file :
Tito_Scwrl_1TIQ.pdb
: