Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGYRILIVEDDVMIGDLLQKILQREGYRVI-WKTDGADVL-SVIQKVDLVIMDVMLPGEDGYQMSAKIKKLGLGIPVIFLSARNDMDSKLQGLQIG-EDYMVKPFDPRELLLRMRNMLEHHYGTFTQIKHLYIDAVTKKVFNESLH---DEVLFTAIERKIFFYLYENRDSILTKEHFFEYLWQLEDRNPNIVNVHIKKIRAKINDQAGEMIENIYGEGYRLNTVVKK
4KFC Chain:A ((4-186))
-----VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWS-AVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHS---APDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW-----GPNAV-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4KFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93128 for 1215 contacts (-76.6/contact) +
2D Compatibility (PS) -19344 + (NN) -10940 + (LL) 3492
1D Compatibility (HY) -13600 + (ID) 2950
Total energy: -136470.0 ( -112.32 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_4KFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KFC-query.scw
PDB file :
Tito_Scwrl_4KFC.pdb
: