Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLED--QCHGQAVFESLYQQIEYISELTNEFNL-------YSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIELHYK---PADQDVIWMSNTLWMERLFDNIFQNTLRHSKA----KKMEVTIEHGD----VFIRDDGIGFDRNESSEGLGLKIIEDTCRL-LAITYELHTNDNGTGFLFSKE |
3DGE Chain:A ((14-220)) | --------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKA---YAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEA-YIDPTRIRQVLL-NLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKD-----RIFEQFYRVDSSLTYEVPG--TGLGLAITKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47789 for 1164 contacts (-41.1/contact) +
2D Compatibility (PS) -19884 + (NN) -7314 + (LL) 12512
1D Compatibility (HY) -13200 + (ID) 2500
Total energy: -78175.0 ( -67.16 by residue)
QMean score : 0.397
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