Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTE-VINPNTFSSFIYANADAQNTTDTFYVKVSRGTYT-GNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 3SMJ Chain:A ((86-144)) | -----------------------------------------------------------------------------RNGFNRSYAG-------KNAVAYGKGTYFAVNANYSANDTYSRPDANGRKHVYYVRVLTGIYTHGN------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1459 for 219 contacts (-6.7/contact) +
2D Compatibility (PS) -6039 + (NN) -1237 + (LL) 14528
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 1993.0 ( 9.10 by residue)
QMean score : 0.121
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